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---
title: Scientists Are Genetically Modifying Climate-Friendly Rice
description: Jennifer Doudna's Innovative Genomics Institute is genetically modifying rice to emit less methane—a potent greenhouse gas.
canonical: https://time.com/6132369/genetically-modified-rice-methane-emissions/
author: TIME
article:opinion: false
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article:published_time: 2022-01-03T17:46:41.000Z
article:modified_time: 2026-10-14T09:17:58.095Z
article:section: Climate
og:title: Scientists Are Genetically Modifying Climate-Friendly Rice
og:description: Jennifer Doudna's Innovative Genomics Institute is genetically modifying rice to emit less methane—a potent greenhouse gas.
og:url: https://time.com/6132369/genetically-modified-rice-methane-emissions/
og:site_name: TIME
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og:image:alt: China Jiangsu Agriculture
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twitter:title: Scientists Are Genetically Modifying Climate-Friendly Rice
twitter:description: Jennifer Doudna's Innovative Genomics Institute is genetically modifying rice to emit less methane—a potent greenhouse gas.
twitter:image: https://static.time.com/v3/assets/bltea6093859af6183b/blt22e3334fdeabf053/698a212386f68e80b06f0c31/rice-farming-china.jpg?branch=production&width=1024&quality=75&auto=webp&crop=16:9
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![](https://static.time.com/v3/assets/bltea6093859af6183b/blt22e3334fdeabf053/698a212386f68e80b06f0c31/rice-farming-china.jpg?branch=production&width=1024&quality=75&auto=webp&crop=16:9)


# Inside the Project to Genetically Modify Rice to Emit Fewer Greenhouse Gases

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<!-- video src="https://cdn.jwplayer.com/manifests/CIHrS8Mv.m3u8" -->
## Video: Generation Now: The Fight for Climate Justice

[Watch (HLS stream): Generation Now: The Fight for Climate Justice](https://cdn.jwplayer.com/manifests/CIHrS8Mv.m3u8) (14:03)

![Generation Now: The Fight for Climate Justice](https://cdn.jwplayer.com/v2/media/CIHrS8Mv/poster.jpg?width=720)

_Published 2021-11-05. Today’s young people are coming of age just as the stable climate that has allowed previous generations to thrive on our planet begins to visibly break down—and just before our last chance to stop it falls out of reach._


by 

[Eric Roston / Bloomberg](https://time.com/author/bloomberg/)


## Eric Roston / Bloomberg


Contributor

Jan 3, 2022 5:46 PM UTC

Today’s young people are coming of age just as the stable climate that has allowed previous generations to thrive on our planet begins to visibly break down—and just before our last chance to stop it falls out of reach. 

by 

[Eric Roston / Bloomberg](https://time.com/author/bloomberg/)


## Eric Roston / Bloomberg


Contributor

Jan 3, 2022 5:46 PM UTC

A cup of tea in 2006 changed genetic engineering forever.

Jill Banfield, a University of California at Berkeley ecosystem scientist and 1999 MacArthur Foundation fellow, had become curious in 2006 about mysterious repeating DNA sequences that were common in microbes that live in some of the planet’s most extreme environments, such as deep-sea heat vents, acid mines and geysers. She just needed a biochemist to help explain what the sequences known as Crispr/Cas9 were, and ideally somebody local.

The best scientist-location tool available to the highly decorated PhD researcher—a web search—recommended a Berkeley RNA specialist named [Jennifer Doudna](https://time.com/4157570/jennifer-doudna/). The two met for tea at a campus lunch spot. Doudna hadn’t heard of [Crispr](https://www.bloomberg.com/quicktake/gene-editing), a kind of microbial immune system, and was intrigued. So much so that over the next few years she would go on to solve the sequence’s structure, which turned out to be something of a [miraculous cut-and-paste tool for DNA](https://time.com/4377130/crispr-genome-editing/). The discovery heralded a new era of genomics that is revolutionizing science and multiple industries and earned Doudna half the [2020 Nobel Prize in chemistry](https://time.com/5897538/nobel-prize-crispr-gene-editing/).

Now, 15 years after their initial meeting, Banfield, Doudna and a large team of co-authors have published a [paper](https://www.nature.com/articles/s41564-021-01014-7) that takes a major step toward solving the thorny problem of how to study and alter genomes of microbes living in complicated real-world environments, such as the gut microbiome or soil. The complexity of microbial communities has been a major obstacle to discovering technologies that can prevent diseases and improve agriculture. It’s a critical step toward curbing methane, a harmful greenhouse gas that is emitted during rice production.


The work is a part of the Innovative Genomics Institute, a consortium Doudna founded to develop uses for Crispr and other [genetic engineering techniques to solve problems in health](https://time.com/time-person-of-the-year-2016-crispr-runner-up/), food production and elsewhere. The IGI in July received a $3 million gift from an anonymous donor to pursue climate work, and Banfield’s research on microbial ecosystems is fundamental to that push.

**_Read more_**_:_ [_How Gene Editing Could Save Coral Reefs_](https://time.com/5250927/crispr-gene-editing-coral-reefs/)

Soil is “the most difficult ecosystem on the planet to study,” Banfield said. “It’s the most complex. It really was the Holy Grail to be able to get any insights into soil microbial communities.”

Much of the IGI’s climate work is focused on the science of rice, a major source of calories for more than half the world. Beyond the primary problem of ensuring people have enough, rice also presents a significant climate challenge. The crop is grown in flooded fields. That water cuts off oxygen to the soil, which allows methane-producing microbes to thrive: Rice production is responsible for as much as 34 million tons of methane a year, or about 2% of greenhouse-gas emissions. China and India make up half that total.


Rice fields are like smokestacks for soil methane, and to shut down those emissions, scientists first need to understand the microbes. The trouble has been that culturing microbial communities and tinkering with them in a lab with traditional tools “could take years or might fail altogether,” IGI authors write. Their new paper demonstrates that using a Crispr-based system can “accelerate this process to weeks.”

Shutting down the rice methane spigot might require any of several alterations, either to the plants themselves or the microbial network into which the roots grow. Engineered solutions might range from introducing microbes that can eat methane in oxygen-free conditions to just flat-out eliminating specific organisms from the soil, the way antibiotics kill disease-causing bacteria.

“This is all very blue-sky at the present time,” Banfield said. “First, we want to understand the pieces and how they fit together.”


**_Read_** **_more_**_:_ [_Seeding the Ocean: Inside a Michelin-Starred Chef’s Revolutionary Quest to Harvest Rice From the Sea_](https://time.com/5926780/chef-angel-leon-sea-rice/)

Pamela Ronald is a University of California at Davis professor who has studied rice her entire career and written a book on the [future of food](https://bookshop.org/books/tomorrow-s-table-organic-farming-genetics-and-the-future-of-food/9780199342082). More than a decade ago she and a colleague identified the gene used to develop flood-tolerant rice that’s now grown by more than 6 million farmers in India and Bangladesh.

There are more than [130,000](https://www.genebanks.org/genebanks/irri/) kinds of rice. Lurking in those genomes may be overlooked evolutionary skills that scientists could graft into agricultural varieties, for heat resistance, nutrition or disease prevention. Ronald’s lab is looking for changes that, combined with Banfield’s microbial communities, could lead to lower-emission crops. An even greater challenge awaits in the digestive tracts of cattle and other ruminants, which are responsible for more than 5% of global emissions.


The agricultural sector has plenty of options to cut emissions in the meantime, while Banfield, Ronald, Doudna and others genetically engineer new possibilities.

Growing more rice in the same acreage leads to lower emissions; every 1% gain in yield also cuts methane emissions by about 1%. Flooding rice fields less often can cut emissions by up to half. Farmers who can control water flow to fields nimbly have found alternating wet and dry periods during the growing season can cut emissions much more. (Dry periods can cause more nitrous-oxide emissions, alas, another potent greenhouse gas). Other promising techniques include plowing rice straw back into fields in the off-season, and seeding fields with biochar, a kind of charcoal, to encourage greater carbon storage in soil.

Timothy Searchinger, a senior research scholar at Princeton University’s Center for Policy Research on Energy and the Environment, welcomes progress toward a high-ambition, high-reward genetic-engineering breakthrough in concert with proven real-world techniques—the topic of a [policy paper](https://scholar.princeton.edu/tsearchi/publications/opportunities-reducemethane-emissions-fromglobal-agriculture) he issued in November.


“It’s entirely a practical challenge,” he said. “How do you actually make this stuff happen? What are the incentives to make this happen? The practical challenges are real but that doesn’t mean you can’t get around them.”

With Crispr comes the promise that practical challenges can be surmounted at the molecular level. Perhaps even over [tea](https://www.nature.com/articles/s41438-019-0225-4).


## Transcript

[00:02] [Namrata Iyer]: I think some of the biggest challenges my generation faces is convincing
[00:07] the previous generations about why it's important to talk about what we believe in.
[00:13] [Greta Thunberg]: We can't choose between us young people saying to adults you must
[00:18] behave but we can't wait for us to become the ones in charge because we don't have time
[00:23] for that.
[00:24] [Timothée Chalamet]: Your youth does not have to work against you by way of experience,
[00:27] your youth can be a virtue by way of what you ethically and earnestly expect of the
[00:32] world.
[00:33] [Billie Eilish]: People can be so selfish about the environment and their experience
[00:38] versus the globe and literally our lifespan.
[00:42] [Alexandria Ocasio-Cortez]: The America we grew up in is like nothing like the America
[00:48] our parents or grandparents grew up in.
[00:51] [Nyke Slawik]: When you have young people who are confronted with not having a future
[00:56] at all of course this is going to radicalize a whole generation.
[01:02] This is a question of survival basically.
[01:07] [John Kerry]: I don't doubt that we will get to a net zero carbon economy.
[01:13] Will we get there fast enough to heed the science and avoid the worst consequences?
[01:17] That's the battle.
[01:19] That's what we're trying to do with Glasgow.
[01:22] [Thunberg]: What do we want?
[01:23] [Audience]: Climate justice.
[01:24] [Thunberg]: When do we want it?
[01:25] [Audience]: Now.
[01:27] [Thunberg]: What do we want?
[01:28] [Audience]: Climate justice.
[01:29] [Thunberg]: When do we want it?
[01:30] [Audience]: Now.
[01:31] [Thunberg]: Thank you.
[01:32] [Justin Worland]: This generation has reframed the way we talk and think about climate to
[01:36] make it an issue of intergenerational justice.
[01:39] The question is will this anger turn into action?
[01:42] Will leaders who have been listening actually take the message to heart and do something
[01:48] about it?
[01:49] [Kerry]: Our diplomacy is guided by what the scientists are telling us we must achieve.
[01:55] Three years ago they had a report in 2018 the IPCC gave us 12 years within which to
[02:01] make the critical decisions to avoid the worst consequences of the climate crisis.
[02:06] [Hoesung Lee]: Limiting warming to 1.5 degrees is not impossible but will require unprecedented
[02:13] transitions in all aspects of society.
[02:16] [Worland]: It was alarming in its the seriousness with which it portrayed the consequences of
[02:21] climate change.
[02:22] We're talking about hundreds of millions of people migrating.
[02:25] We're talking about the possibility of countries disappearing in their entirety.
[02:29] We're talking about a world that is totally transformed.
[02:33] Already 85 percent of the world's population has been affected by human-caused climate
[02:37] change.
[02:38] [Jim Skea]: The message is over to governments at this stage.
[02:42] We've told you what you—the scientific facts, the evidence, the costs.
[02:47] It is up to the governments now to decide what to do with it.
[02:51] [Ciara Nugent]: We've had loads and loads of reports about climate change over the last
[02:54] couple of decades and the massive threat to our planet but despite all of the science
[02:59] there are still people who are skeptical about how much of a big deal it really is.
[03:05] And I think for those people it's much harder to dismiss young people, normal school kids
[03:12] because they're part of their communities, they're part of their families often.
[03:16] [Nyke Slawik]: What we need is politicians who implement the policies in their home countries
[03:23] and that's—that's what has not been happening in the last years.
[03:27] And so now young people are saying why go to school?
[03:33] Why go to university?
[03:35] Why start planning a family? Why buy a house when I don't even know that in 50 years time
[03:42] or 70 years time I will still have a future, because right now that's at stake.
[03:50] [Ocasio-Cortez]: If we do nothing this is what's going to happen: sea levels are going rise,
[03:56] crops are going to die out, there will be mass starvation.
[04:00] There's going to be all of these things that are going to happen and kids see that,
[04:04] they internalize it.
[04:08] [Charlotte Alter]: Researchers have found that young voters form their lifelong political
[04:13] attitudes in response to the events of their early adulthood, mostly late teens into the
[04:20] late 20s.
[04:21] And for millennials and gen z that period of time has been defined by climate catastrophe.
[04:29] [Christian Hidalgo]: I'm from Bakersfield, California, central valley.
[04:32] Earlier today I've been getting snapchats from all of my friends talking about how orange
[04:35] the sky is because of the wildfire surrounding us.
[04:39] The closest wildfire is probably not even 60 miles away but we have horrible air quality
[04:44] like we're—I'm in the middle of the valley and it just it really strongly affects us
[04:49] and that's what—that's what's drawn me to climate activism.
[04:51] [Isabella Guariniello]: This is my first strike ever.
[04:54] I watched a bunch of like sad penguin videos on YouTube and I started to get really sad
[05:00] when I learned about the effects of animals and like how much earth that we're actually
[05:05] losing.
[05:06] It's hard not to get discouraged when you're constantly learning about what people before
[05:10] you did wrong.
[05:11] [Sassy Fernandez]: Like I remember being in elementary school and watching Al Gore's documentary
[05:16] about climate change and the effects that we could be seeing within the next 10, 15
[05:22] years and so far he's been pretty right about everything that he said in his documentary.
[05:27] I totally forgot what it was called but shout outs to my science teacher.
[05:31] [Thunberg]: We are being betrayed by those in power and they are failing us but we will
[05:38] not back down.
[05:45] And if you feel threatened by that then I have some very bad news for you.
[05:52] We will not be silenced because we are the change and change is coming whether you like
[05:56] it or not.
[06:00] We need to work together intergenerational of course that is the only way and we need
[06:06] to—everyone needs to participate and help out in the way we can.
[06:12] So I'm doing what I can.
[06:14] I'm trying to use my voice to spread awareness and to—to put pressure on those in power.
[06:21] [Alter]: When TIME put Greta on the cover in 2019 she had just gone from being a school
[06:27] girl protesting alone outside of Swedish parliament to being the leader of a global climate movement.
[06:36] That year her activism inspired four million people to join the global climate strike in
[06:42] 2019 which was at that point the largest climate movement in world history.
[06:47] [Worland]: Across the world with very few exceptions there are examples of people who
[06:52] have been inspired by her and have led—who've taken up the mantle the Fridays for Future
[06:56] movement in countries across the world.
[06:59] [Thunberg]: I'm not a leader or the face of the climate movement, I'm just one of many
[07:05] faces.
[07:06] [Vanessa Nakate]: There are far too little evidence of the 100 billion dollars per year
[07:13] that was promised to help climate vulnerable countries to meet these challenges.
[07:18] In fact, those funds were promised to arrive by 2020 and we are still waiting.
[07:26] [Nugent]: Vanessa Nakate, a Ugandan climate activist, is one of many people who have been
[07:31] working to remind us that climate action is going to be expensive and many countries who
[07:36] are most vulnerable to climate change can't afford to pay for it alone.
[07:40] [Nakate]: Historically Africa is responsible for only three percent of global emissions
[07:46] and yet some Africans are already suffering some of the worst and brutal impacts of climate
[07:52] change, so to me climate justice doesn't just have to be about reducing greenhouse gas emissions
[08:00] it goes beyond the primary disasters that we see.
[08:03] It is what happens in the aftermath of those disasters, what happens to families, what
[08:10] happens to individuals, what happens to communities.
[08:14] [Worland]: You think about the fact that the U.S. has emitted a quarter of emissions historically.
[08:19] Africa has emitted three percent of emissions historically and the U.S. is able to isolate
[08:27] itself, to pay for adaptation, to pay for the costs in a way that developing countries
[08:34] in sub-saharan Africa and across the globe just can't.
[08:38] And so climate change is a justice issue on many different levels.
[08:42] [Ngozi Okonjo-Iweala]: We we have to bear in mind that whether you're rich or poor,
[08:46] a rich country or poor country, there are some things you just cannot do on your own.
[08:51] You can't deliver on this pandemic on your own, you cannot deliver on climate change
[08:57] on your own.
[08:58] [Nakate]: So what we really want is a future that is healthy, that is sustainable, that
[09:04] is clean, that is livable and equitable for all of us.
[09:09] [Nugent]: Some of the activists that I speak to are realizing they can't wait for the older
[09:13] generation to take action so they're trying to get elected to governments themselves.
[09:17] In Germany, the Green Party has really been in the ascendancy.
[09:21] In September they've almost doubled their number of seats in parliament and one of the
[09:26] 118 lawmakers they now have is Nyke Slawik.
[09:32] She's a 27 year old German politician who was elected in September to the Bundestag
[09:37] and she has been involved in climate activism for almost 12 years and now she has political
[09:44] power to make a difference.
[09:46] [Slawik]: The time of just implementing small changes has passed and this is a reality we
[09:56] as younger politicians are bringing with us to the parliament now but of course there's
[10:02] lots of older colleagues who have not quite grasped this yet, and I think this is why
[10:10] we might be more determined to not go for the small compromises, to be a bit more rebellious
[10:17] about these things.
[10:19] The last German government has decided to exit coal in 2038 which is still too late
[10:26] way too late but now we even have the chance to accelerate energy transition from coal
[10:35] to renewables way quicker and that's a major achievement of the youth climate movement.
[10:42] [Alter]: In the United States young voters across the political spectrum understand that
[10:47] climate change is a major issue that needs to be addressed, they just disagree on how
[10:52] best to do it.
[10:53] So even younger Republicans, Republicans under 40, they understand that climate change is
[10:59] happening, they understand that something has to be done about it, they just don't agree
[11:03] with their more progressive peers about the scale and scope of what that intervention
[11:08] needs to be.
[11:10] So this is a big shift from a couple generations ago when you had one side insisting that climate
[11:16] change was a problem and the other side basically denying that it was happening at all.
[11:22] [Worland]: When TIME spoke to Emmanuel Macron, the President of France, he spoke about how
[11:26] the youth movement had made him want to do better.
[11:29] When I talked to the U.N. Secretary General he talked about how he was trying to bring
[11:33] youth into the climate discussion because it had enthused him and he thought it would
[11:38] help change the conversation.
[11:40] Talking to members of Congress about how inspirational Greta was really made clear to me that she
[11:46] was changing the conversation.
[11:48] [Nugent]: In my reporting activists are telling me that COP 26 is a crucial moment to find
[11:53] out if politicians are really listening to them and really taking action or if they're
[11:58] just saying they're listening and delaying action.
[12:01] [Nakate]: Leaders keep praising young people for standing up and protesting but saving
[12:07] the world needs action, it needs decisions from the leaders, decisions that prioritize
[12:13] the lives of the people and the planet, and that is not something that we are doing.
[12:19] The words of the leaders are not matching up with their actions.
[12:24] [Thunberg]: Words.
[12:25] Words that sound great but so far has led to no action.
[12:33] Our hopes and dreams drown in their empty words and promises.
[12:39] Of course we need constructive dialogue but they've now had 30 years of blah blah blah
[12:44] and where has that led us?
[12:47] [Jane Goodall]: I'm about to leave the world and leave it behind me with all the mess whereas
[12:51] young people have to grow up into it.
[12:54] That's why they need every bit of help they can.
[12:57] And if, you know, if they succumb to the doom and gloom ,which many have, then they lose
[13:04] hope.
[13:05] If you lose hope that's the end, because if you don't hope that there's a way out, if
[13:11] you don't hope that your actions can make a difference then you sink into apathy and
[13:16] do nothing.
[13:19] So hope is absolutely crucial if we're to get through this.
[13:27] [Singing]: We're going to strike because our waters are rising.
[13:30] We're going to strike because our people are dying.
[13:32] We're going to strike for life and everything we love.
[13:36] We're going to strike for you, will you strike for us?
[13:38] We're going to strike for you, will you strike for us?
[13:41] We're going to strike because our waters are rising.
[13:43] We're going to strike because our people are dying.
[13:46] We're going to strike for life and everything we love.
[13:49] We're going to strike for you, will you strike for us?
[13:51] We're going to strike for you, will you strike for us?
[13:54] Beautiful.

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